SRP017032

See detailed project information

   Project:  SRP017032
   Organism:  Homo sapiens
   Study Title:  Homo sapiens Genome sequencing
   Center Name:  Harvard University
   Description:  Single cell whole genome amplification and sequencing.
   Cell Type:  Colorectal cancer
   Median Sequencing Depth:  0.973828
   Publication:  Genome-Wide Detection of Single Nucleotide and Copy Number Variations of a Single Human Cell
   DOI:  10.1126/science.1229164

See including samples and runs (Click accession number in the table to see sample/run information)

   Number of samples:  16
   Number of runs:  177
   Number of single cell runs:  177
   
IDProject AccessionSample AccessionRun AccessionRaw DepthGenerated FASTQ Files
(Copy ftp address to download)		SRA Files
(Copy ftp address to download)
1SRP017032SAMN01797704SRR61149229.8899221300ftp.sra.ebi.ac.uk/vol1/fastq/SRR611/SRR611492/SRR611492_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR611/SRR611492/SRR611492_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR611/SRR611492
2SRP017032SAMN01805342SRR6173570.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617357/SRR617357_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617357/SRR617357_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617357
3SRP017032SAMN01805342SRR6173580.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617358/SRR617358_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617358/SRR617358_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617358
4SRP017032SAMN01805342SRR6173590.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617359/SRR617359_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617359/SRR617359_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617359
5SRP017032SAMN01805342SRR6173600.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617360/SRR617360_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617360/SRR617360_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617360
6SRP017032SAMN01805342SRR6173610.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617361/SRR617361_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617361/SRR617361_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617361
7SRP017032SAMN01805342SRR6173620.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617362/SRR617362_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617362/SRR617362_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617362
8SRP017032SAMN01805342SRR6173630.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617363/SRR617363_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617363/SRR617363_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617363
9SRP017032SAMN01805342SRR6173640.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617364/SRR617364_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617364/SRR617364_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617364
10SRP017032SAMN01805342SRR6173650.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617365/SRR617365_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617365/SRR617365_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617365
11SRP017032SAMN01805342SRR6173660.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617366/SRR617366_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617366/SRR617366_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617366
12SRP017032SAMN01805342SRR6173670.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617367/SRR617367_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617367/SRR617367_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617367
13SRP017032SAMN01805342SRR6173680.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617368/SRR617368_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617368/SRR617368_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617368
14SRP017032SAMN01805342SRR6173690.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617369/SRR617369_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617369/SRR617369_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617369
15SRP017032SAMN01805342SRR6173700.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617370/SRR617370_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617370/SRR617370_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617370
16SRP017032SAMN01805342SRR6173710.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617371/SRR617371_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617371/SRR617371_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617371
17SRP017032SAMN01805342SRR6173720.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617372/SRR617372_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617372/SRR617372_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617372
18SRP017032SAMN01805342SRR6173730.0510819230ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617373/SRR617373_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617373/SRR617373_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617373
19SRP017032SAMN01805342SRR6173740.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617374/SRR617374_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617374/SRR617374_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617374
20SRP017032SAMN01805342SRR6173750.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617375/SRR617375_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617375/SRR617375_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617375
21SRP017032SAMN01805342SRR6173760.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617376/SRR617376_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617376/SRR617376_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617376
22SRP017032SAMN01805342SRR6173770.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617377/SRR617377_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617377/SRR617377_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617377
23SRP017032SAMN01805342SRR6173780.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617378/SRR617378_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617378/SRR617378_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617378
24SRP017032SAMN01805342SRR6173790.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617379/SRR617379_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617379/SRR617379_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617379
25SRP017032SAMN01805342SRR6173800.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617380/SRR617380_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617380/SRR617380_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617380
26SRP017032SAMN01805342SRR6173810.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617381/SRR617381_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617381/SRR617381_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617381
27SRP017032SAMN01805342SRR6173820.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617382/SRR617382_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617382/SRR617382_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617382
28SRP017032SAMN01805342SRR6173830.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617383/SRR617383_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617383/SRR617383_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617383
29SRP017032SAMN01805342SRR6173840.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617384/SRR617384_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617384/SRR617384_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617384
30SRP017032SAMN01805342SRR6173850.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617385/SRR617385_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617385/SRR617385_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617385
31SRP017032SAMN01805342SRR6173860.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617386/SRR617386_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617386/SRR617386_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617386
32SRP017032SAMN01805342SRR6173870.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617387/SRR617387_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617387/SRR617387_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617387
33SRP017032SAMN01805342SRR6173880.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617388/SRR617388_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617388/SRR617388_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617388
34SRP017032SAMN01805342SRR6173890.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617389/SRR617389_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617389/SRR617389_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617389
35SRP017032SAMN01805342SRR6173900.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617390/SRR617390_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617390/SRR617390_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617390
36SRP017032SAMN01805513SRR6173910.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617391/SRR617391_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617391/SRR617391_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617391
37SRP017032SAMN01805513SRR6173920.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617392/SRR617392_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617392/SRR617392_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617392
38SRP017032SAMN01805513SRR6173930.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617393/SRR617393_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617393/SRR617393_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617393
39SRP017032SAMN01805513SRR6173940.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617394/SRR617394_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617394/SRR617394_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617394
40SRP017032SAMN01805513SRR6173950.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617395/SRR617395_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617395/SRR617395_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617395
41SRP017032SAMN01805513SRR6173960.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617396/SRR617396_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617396/SRR617396_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617396
42SRP017032SAMN01805513SRR6173970.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617397/SRR617397_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617397/SRR617397_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617397
43SRP017032SAMN01805513SRR6173980.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617398/SRR617398_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617398/SRR617398_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617398
44SRP017032SAMN01805513SRR6173990.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617399/SRR617399_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617399/SRR617399_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617399
45SRP017032SAMN01805513SRR6174000.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617400/SRR617400_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617400/SRR617400_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617400
46SRP017032SAMN01805513SRR6174010.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617401/SRR617401_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617401/SRR617401_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617401
47SRP017032SAMN01805513SRR6174020.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617402/SRR617402_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617402/SRR617402_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617402
48SRP017032SAMN01805513SRR6174030.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617403/SRR617403_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617403/SRR617403_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617403
49SRP017032SAMN01805513SRR6174040.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617404/SRR617404_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617404/SRR617404_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617404
50SRP017032SAMN01805513SRR6174050.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617405/SRR617405_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617405/SRR617405_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617405
51SRP017032SAMN01805513SRR6174060.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617406/SRR617406_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617406/SRR617406_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617406
52SRP017032SAMN01805513SRR6174070.6923795500ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617407/SRR617407_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617407/SRR617407_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617407
53SRP017032SAMN01805513SRR6174080.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617408/SRR617408_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617408/SRR617408_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617408
54SRP017032SAMN01805513SRR6174090.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617409/SRR617409_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617409/SRR617409_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617409
55SRP017032SAMN01805513SRR6174100.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617410/SRR617410_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617410/SRR617410_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617410
56SRP017032SAMN01805513SRR6174110.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617411/SRR617411_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617411/SRR617411_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617411
57SRP017032SAMN01805513SRR6174120.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617412/SRR617412_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617412/SRR617412_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617412
58SRP017032SAMN01805513SRR6174130.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617413/SRR617413_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617413/SRR617413_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617413
59SRP017032SAMN01805513SRR6174140.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617414/SRR617414_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617414/SRR617414_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617414
60SRP017032SAMN01805513SRR6174150.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617415/SRR617415_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617415/SRR617415_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617415
61SRP017032SAMN01805513SRR6174160.9738283630ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617416/SRR617416_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR617/SRR617416/SRR617416_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR617/SRR617416
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